Citation: Chu, Y. Dai, E. Li, Y. Han, G. Pei, G. Ingram, D. R. Thakkar, K. Qin, J. J. Dang, M. Le, X. Hu, C. Deng, Q. Sinjab, A. Gupta, P. Wang, R. Hao, D. Peng, F. Yan, X. Liu, Y. Song, S. Zhang, S. Heymach, J. V. Reuben, A. Elamin, Y. Y. Pizzi, M. P. Lu, Y. Lazcano, R. Hu, J. Li, M. Curran, M. Futreal, A. Maitra, A. Jazaeri, A. A. Ajani, J. A. Swanton, C. Cheng, X. D. Abbas, H. A. Gillison, M. Bhat, K. Lazar, A. J. Green, M. Litchfield, K. Kadara, H. Yee, C. Wang, L. (2023). Pan-cancer T cell atlas links a cellular stress response state to immunotherapy resistance. Nature Medicine, 1-13.

Overview

T Cells:

308,048

Samples:

486

Subjects:

324

Organs:

21

Cancer types:

16

Cell number

Sample/Subject number

Cell type proportion

Tissue fraction

Healthy donor tissues

Uninvolved normal tissues

Primary tumor tissues

Metastatic tumor tissues

Data and software

Processed data: CD8 T cells CD4 T cells MD5Sum

MultiMap R package: MultiMap